Image and Plot Display

hugheslab.display.qshow(img, title=None, axes=None, cmap='gray', dpi=150, figsize=(5, 5), figsizem=None)

Utility to quickly display an image in a matplotlib figure wtih useful defaults.

Arguments:

Keyword Arguments:

titlestr: plot title, default is not title
axes(str, str): x and y axis labels, default is no labels
cmapstr: matplotlib colormap, default is ‘gray’
dpiint: display dpi, default is 150
figsize(float, float): x and y size of figure in inches, default (5,5)
figsizem(float, float): x and y size of figure in mm, default None (overrides figsize if specified)

Returns: tuple of (Figure, AxesImage) : figure and image objects from matplotlib

hugheslab.display.cshow(img, dpi=150, figsize=(10, 5), figsizem=None, phase_cmap='twilight', amp_cmap='gray', title=None)

Utility to quickly display a complex image as two subplots, one for amplitude and one for phase.

Arguments:

Keyword Arguments:

dpiint: resolution of figure in dots per inch (default = 100)
figsizetuple of (float, float): size of figure in inches (default = (10, 5))
figsizemtuple of (float, float): size of figure in millimeters (overrides figsize if specified, default = None)
phase_cmapstr: name of matplotlib colormap to use for phase (default = ‘twilight’)
amp_cmapstr: name of matplotlib colormap to use for amplitude (default = ‘gray’)
titlestr or None: title to set for whole figure (default = None)

Returns:

tuple of (Figure, (Axes, Axes)) : figure and axes objects from matplotlib

hugheslab.display.qplot(data1, data2=None, title=None, axes=None, dpi=150, figsize=(5, 5), figsizem=None)

Utility to quickly display a plot in a matplotlib figure wtih useful defaults.

Arguments: